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Modified on 10/26/2005 at 00:19

objectives

Our project aims at the development of bioinformatic methods to identify protein-protein interaction sites involving regulatory domains, building blocks of modular proteins. These domains specifically recognise small sequence motifs. We are developing new methods to predict the binding specificities for each domain of interest using a combination of structure prediction and in silico screening of peptide libraries. These predictions will be validated experimentally on domains often involved in the DNA repair process (FHA, BRCT, Polo or Tudor). Based on in vitro assays and in vivo yeast experiments, the mutagenesis of the interaction site will provide unique tools to dissect the importance of every interaction in the complex networks of interactions.